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What is transcriptome?

Updated: 12/19/2022
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What is the relationship of a transcriptome to the genetic code?

A transcriptome is the percentage of the genetic code that is turned into RNA molecules. It transcribes to less than five percent of the genome in humans.


Definition of transcriptomics in molecular biology?

Transcriptomics is the study of all the RNA transcripts produced by the genes of an organism under specific conditions. It involves analyzing the quantity, structure, expression, and regulation of RNA molecules to gain insights into gene expression patterns and molecular mechanisms within cells. Transcriptomics is a valuable tool for understanding how genes are controlled and how they function in various biological processes.


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What is c-DNA library and How it is constructed from a RNA?

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What has the author Xin He written?

Xin He is a computational biologist known for his work on gene regulation networks and transcriptome analysis. He has contributed to research on single-cell biology and epigenetics, particularly in the context of cancer.


What is Nextgen Life Sciences Which services are they provide?

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What are the Effects of pine oil on bacterial blight?

Genetic changes that correlate with the pine-oil disinfectant-reduced susceptibility mechanism of Staphylococcus aureus. Lamichhane-Khadka R, Riordan JT, Delgado A, Muthaiyan A, Reynolds TD, Wilkinson BJ, Gustafson JE.SourceDepartment of Biology, New Mexico State University, Las Cruces, NM 88003-8001, USA. AbstractAIMS:To identify factors associated with the Staphylococcus aureus pine-oil disinfectant-reduced-susceptibility (PD(RS)) mechanism and to describe one possible PD(RS) model.METHODS AND RESULTS:Comparative genomic sequencing (CGS) and microarray analysis were utilized to detect mutations and transcriptome alterations that occur in a S. aureus PD(RS) mutant. Mutant analysis, antimicrobial gradient plates, growth studies and 3-hydroxy-3-methylglutaryl coenzyme A synthase assays were then performed to confirm the biological consequences of the 'omics' alterations detected in a PD(RS) mutant. CGS uncovered three mutations in a PD(RS) mutant in a(n): alcohol dehydrogenase (adh), catabolite control protein A (ccpA) and an NADPH-flavin oxidoreductase (frp). These mutations lead to increased growth rates; increased transcription of an NAD-dependent D-lactate dehydrogenase gene (ddh); and increased flux through the mevalonate pathway. PD(RS) mutants demonstrated reduced susceptibility to bacitracin and farnesol, and one PD(RS) mutant displayed upregulation of bacA, a bacitracin-resistance gene. Collectively, this evidence demonstrates altered undecaprenol metabolism in PD(RS) mutants.CONCLUSIONS:The PD(RS) mechanism proposed results from increased catabolic capabilities and increased flux through the mevalonate pathway as well as altered bactoprenol physiology.SIGNIFICANCE AND IMPACT OF THE STUDY:A novel mechanism that bacteria utilize to overcome the killing effects of PD formulations is proposed that is unique from the PD(RS) mechanism of the enterobacteraciae.


Why bioinformatics play a big role in human genome project?

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